gunfolds

• conversions
  • clingo
    • a2edgetuple
    • c2edgepairs
    • clingo2num
    • clingo_preamble
    • clingo_wedge
    • drasl_jclingo2g
    • encode_list_sccs
    • encode_sccs
    • g2clingo
    • g2wclingo
    • msl_jclingo2g
    • numbered_g2clingo
    • numbered_g2wclingo
    • old_g2clingo
    • rasl_a2edgetuple
    • rasl_c2edgepairs
    • rasl_jclingo2g
    • rate
  • external
    • g2ig
    • graph2dot
    • graph2nx
    • nx2graph
  • internal
    • adjs2graph
    • bg2num
    • dict_format_converter
    • edgepairs2g
    • g2ian
    • g2num
    • g2vec
    • Glag2CG
    • graph2adj
    • graph2badj
    • ian2g
    • nodenum
    • num2CG
    • nxbp2graph
    • ug2num
    • vec2adj
    • vec2g
• estimation
  • grangercausality
    • gc
  • linear_model
    • AB2intAB
    • amap
    • bnf2CG
    • data2AB
    • data2graph
    • data2VARgraph
    • decide_absences
    • drawsamplesLG
    • drawsamplesMA
    • estimateG
    • estimateSVAR
    • G2AH
    • G2SVAR
    • genData
    • getAgraph
    • getAring
    • initRandomMatrix
    • listplace
    • nllf
    • nllf2
    • noiseData
    • npG2SVAR
    • presence_probs
    • randomSVAR
    • randomSVARs
    • randweights
    • sampleWeights
    • scoreAGraph
    • stableVAR
    • symchol
    • transitionMatrix
    • transitionMatrix2
    • transitionMatrix3
    • transitionMatrix4
    • VARbic
    • weight_and_mask
    • x2M
  • pc
    • dpc
    • fdr
    • fdrCutoff
    • fdrQ
    • independent
    • independent_
    • kernel
    • moment22
    • np_fisherZ
    • residuals_
• solvers
  • declarative
    • clingo_msl
      • g2clingo_msl
      • msl
      • msl_command
      • rasl_msl
      • rate
    • clingo_rasl
      • drasl
      • drasl_command
      • drate
      • glist2str
      • rasl
      • rasl_command
      • rate
      • weighted_drasl_program
  • imperative
    • traversal
      • add2edges
      • addaAedge
      • addacedge
      • addanedge
      • addapath
      • addavedge
      • addaVpath
      • check3
      • checkable
      • checkAedge
      • checkApath
      • checkbedges
      • checkcedge
      • checkedge
      • checker
      • checkerDS
      • checkvedge
      • childrenedges
      • chunks
      • cleanedges
      • cleanVedges
      • cloneempty
      • conformanceDS
      • del2edges
      • del_empty
      • delaAedge
      • delacedge
      • delanedge
      • delapath
      • delavedge
      • delaVpath
      • edge_function_idx
      • edge_increment_ok
      • esig
      • forks
      • gpurgepath
      • gsig
      • inorder_check2
      • inorder_checks
      • invertCDSelement
      • isAedge
      • isApath
      • isCedge
      • isedge
      • isvedge
      • length_d_loopy_paths
      • length_d_paths
      • longpaths_pick
      • make_allforks_and_rest
      • make_emptyforks
      • make_fullforks
      • make_longpaths
      • makechains
      • makesink
      • makesinks
      • mask2edges
      • maskaAedge
      • maskaCedge
      • maskanedge
      • maskapath
      • maskavedge
      • maskaVpath
      • memo_no_return
      • ok2add2edges
      • ok2addaAedge
      • ok2addacedge
      • ok2addanedge
      • ok2addanedge1
      • ok2addanedge2
      • ok2addapath
      • ok2addavedge
      • ok2addaVpath
      • prune_sort_CDS
      • prunepaths_1D
      • purgepath
      • selfloops
      • signature
      • single_nodes
      • supergraphs_in_eq
      • threedges_pick
      • try_till_d_path
      • try_till_path
      • twoedges_pick
      • v2g22g1
      • vedgelist
    • unknownrate
      • add2set_
      • add2set_loop
      • allsloops
      • bconflictor
      • build_loop_step
      • cacheconflicts
      • conflictor
      • conflictor_set
      • conflictors
      • confpairs
      • del_loop
      • delAloop
      • e2num
      • ekey2e
      • forward_loop_match
      • gen_loops
      • iteqclass
      • lconflictors
      • lconfpairs
      • le2num
      • liteqclass
      • loop2graph
      • main
      • matchAloop
      • perm_circular
      • prune_conflicts
      • prune_loops
      • reverse
      • reverse_edge_match
      • reverse_loop_match
      • skip_conflict
      • skip_conflictors
      • start_progress_bar
• utils
  • bfutils
    • all_undersamples
    • bidirected_inc
    • call_u_conflicts
    • call_u_conflicts2
    • call_u_conflicts_d
    • call_u_equals
    • call_u_equals2
    • call_undersamples
    • cc_all
    • cc_undersamples
    • check_conflict
    • check_conflict_
    • check_equality
    • compact_call_undersamples
    • compat
    • compatible
    • dens2edgenum
    • dincrement_u
    • directed_inc
    • edgenum2dens
    • forms_loop
    • iall
    • icompat
    • ilength
    • increment
    • increment_u
    • is_sclique
    • loadgraphs
    • make_rect
    • overshoot
    • pure_directed_inc
    • savegraphs
    • undersample
  • calc_procs
    • get_process_count
      • get_process_count()
  • clingo
    • clingo
    • run_clingo
  • comparison
    • compatible_at_u
    • gcd4scc
    • has_root
    • has_self_loops
    • has_sink
    • randSCC
    • search_match
    • SM_converging
    • SM_fixed
  • ecj
    • cloneBfree
      • cloneBfree()
    • dfs_topsort
      • dfs_topsort()
    • gcd
      • gcd()
    • has_unit_cycle
      • has_unit_cycle()
    • listgcd
      • listgcd()
    • listgcd_r
      • listgcd_r()
    • reachable
      • reachable()
    • scc
      • scc()
    • tr
      • tr()
    • walk
      • walk()
  • graphkit
    • _normed_OCE
    • _normed_undirected_OCE
    • _OCE
    • _undirected_OCE
    • addanedge
    • addAring
    • addedges
    • bedgelist
    • bidirected_no_fork
    • bp_mean_degree_graph
    • bp_pow_degree_graph
    • cerror
    • clean_leaf_nodes
    • complement
    • degree_ring
    • delanedge
    • deledges
    • density
    • digonly
    • edgelist
    • ensure_gcd1
    • ensure_graph_gcd1
    • fullyconnected
    • gcd1_bp_mean_degree_graph
    • gcd4scc
    • gtranspose
    • inbedgelist
    • inedgelist
    • isdedgesubset
    • isedgesubset
    • mean_degree_graph
    • merge_graphs
    • merge_list
    • no_children
    • no_parents
    • OCE
    • oerror
    • pow_degree_graph
    • randH
    • randomDAG
    • randomTRIL
    • remove_loop
    • remove_tril_singletons
    • ring
    • ring_sccs
    • ringarcs
    • ringmore
    • scale_free
    • scc_unreachable
    • selfloop
    • shift_labels
    • shift_list_labels
    • subgraph
    • superclique
    • udensity
    • undedgelist
    • upairs
    • update_graph
  • myTimeout
    • timeout
      • timeout()
  • neighborhoods
    • find_nearest_reachable
    • hamming_neighbors
    • ncr
    • num_nATstep
    • num_neighbors
  • simpleloops
    • print_loops
    • simple_loops
  • zickle
    • load
      • load()
    • save
      • save()
• viz
  • dbn2latex
    • addselfedge
    • cdbn_single
    • cdbnprint
    • cdbnsingle
    • cdbnwrap
    • dbnprint
    • dict2graph
    • emacs_vars
    • foldplot
    • g_single
    • getangle
    • gmatrix_fold
    • gmatrix_list
    • gprint
    • graph2dict
    • gsingle
    • matrix_edges
    • matrix_end
    • matrix_fold
    • matrix_grid
    • matrix_list
    • matrix_start
    • output_graph_figure
    • paintSCC
    • unfoldplot
  • gtool
    • circ_position
    • colorcomponents
    • every_edge_control_points
    • g2gt
    • getscreensize
    • gt2g
    • hshift
    • linegraph
    • plotg
    • plotgunfolds